[BioC] IRanges is broken in Cygwin (mingw/math.h)

[Steve Lianoglou]

Hi Enrico,

On Mon, Jul 15, 2013 at 1:10 AM, Enrico Ferrero
<enricoferrero86 at gmail.com> wrote:
> Hi Michael,
>
> I can't seem to install the latest version of IRanges.
> For some reason, bioLite() still tries to pull an old version of IRanges,
> (that still contains the bug):
[snip]
> I'm currently on R version 2.15.1 and Bioconductor version 2.11, trying to
> upgrade to 2.12.
> Am I doing something wrong?

Yes you are.

You need to be running R-3.0.x in order to use bioc 2.12, as is
pointed out in the intro of the Bioconductor installation page:

http://bioconductor.org/install/

HTH,

-steve

--
Steve Lianoglou
Computational Biologist
Bioinformatics and Computational Biology
Genentech