[BioC] getting a list of genomic sequences from a list of gene names

Hervé Pagès hpages at fhcrc.org
Tue Jul 23 04:34:45 CEST 2013


Hi Paul, Michael,

On 07/18/2013 06:41 AM, Paul Shannon wrote:
> Hi Michael,
>
>> enhancing getSeq with GRangesList support would be useful.
>
> I like this idea a lot.  Since GRanges and GRangesList are fundamental classes, and getSeq a fundamental operation, this makes great sense.

I heard you. Just added this to Biostrings devel.

H.

>
>   - Paul
>
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-- 
Hervé Pagès

Program in Computational Biology
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Fred Hutchinson Cancer Research Center
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