[BioC] Error loading GO.db

Martin Morgan mtmorgan at fhcrc.org
Wed Jun 12 15:46:31 CEST 2013


On 06/11/2013 02:23 AM, Ari Eszter wrote:
> Dear Martin,
>
> I had the same problem.
>
>>
>> Another option might be
>>
>>    biocLite(c("AnnotationDbi", "GO.db"), type="source")
>>
>
> With this loading Go.db is finally working under R 3.0.0 on MacOSX

Hi Eszter and others reading the thread --

Glad that works for you. It's likely that other packages that use reference 
classes will have the same problem, and some of these will require the 'devel' 
tools (C compiler, etc) to install with type="source".

In the long run it's better to find the time to update to R-3.0.1.

Martin

>
> Thanks a lot!
>
> Eszter
>
>
>
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