[BioC] Illumina Human 6 V1 expression annotation file

Jinyan Huang jhuang at hsph.harvard.edu
Thu Mar 14 18:50:29 CET 2013


Dear list,

Now I am using Illumina Human 6 BeadChips. But I found the annotation
file is old. They used hg18 gene symbols.

e.g.

CRSP6 should be MED17.
http://www.ncbi.nlm.nih.gov.ezp-prod1.hul.harvard.edu/gene/9440

KIAA0804 should be VPS8
http://www.ncbi.nlm.nih.gov.ezp-prod1.hul.harvard.edu/gene/?term=KIAA0804

But I found the annotation file downloaded from here cannot match the probe id.
http://www.switchtoi.com/annotationprevfiles.ilmn

Anyone have suggestions?

Thank you.

--
Best wishes,

Jinyan HUANG



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