[BioC] Howto annotate blast subject.id with AnnotationDbi

[Arnaud Mounier]

Hi everybody, Hi Marc,

Le 28/05/2013 19:37, Marc Carlson a écrit :
> Hi Arnaud,
>
> It should be fine as long as you remember that the shortened name is
> that of the locus ID, and that you are therefore annotating at the gene
> level (as is the case for all the org packages).
>
> You can see the TAIR website for more clarification about what the
> different IDs mean. Here is a page for the locus ID "AT1G01010":
>
> http://www.arabidopsis.org/servlets/TairObject?type=locus&id=137158
>
> And here is a page for the gene model "AT1G01010.1":
>
> http://www.arabidopsis.org/servlets/TairObject?type=gene&id=138508
Thank's for your response. So is this possible to interrogate a org 
package such as org.At.tair.db in gene model level (aka AT1G01010.1) ?

Ar.

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Arnaud Mounier
INRA - UMR Agroécologie 1347
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