[BioC] Lumi failed to load
Hitoshi Okada
hokada0421 at gmail.com
Fri Oct 11 01:12:51 CEST 2013
Hi,
I have installed R version 3.0.2 (Mac version, MacOS is 10.8.5)and lumi (2.12), and tried to load but failed with the message at bottom.
I appreciate any suggestions to solve this problem. I have updated Bioconductor packages are updated.
Thank you
Hitoshi
> library(lumi)
Loading required package: Biobase
Loading required package: BiocGenerics
Loading required package: parallel
Attaching package: ‘BiocGenerics’
The following objects are masked from ‘package:parallel’:
clusterApply, clusterApplyLB, clusterCall, clusterEvalQ, clusterExport,
clusterMap, parApply, parCapply, parLapply, parLapplyLB, parRapply,
parSapply, parSapplyLB
The following object is masked from ‘package:stats’:
xtabs
The following objects are masked from ‘package:base’:
anyDuplicated, append, as.data.frame, as.vector, cbind, colnames, duplicated,
eval, Filter, Find, get, intersect, lapply, Map, mapply, match, mget, order,
paste, pmax, pmax.int, pmin, pmin.int, Position, rank, rbind, Reduce,
rep.int, rownames, sapply, setdiff, sort, table, tapply, union, unique,
unlist
Welcome to Bioconductor
Vignettes contain introductory material; view with 'browseVignettes()'. To
cite Bioconductor, see 'citation("Biobase")', and for packages
'citation("pkgname")'.
Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
there is no package called ‘minfi’
In addition: Warning message:
replacing previous import by ‘graphics::image’ when loading ‘methylumi’
Error: package or namespace load failed for ‘lumi’
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