[BioC] Installing library package (Marmoset Gene 1.0 ST Array) into R environment

DR DHANJIT KUMAR DAS [guest] guest at bioconductor.org
Mon Oct 28 11:12:15 CET 2013


I would like to analyze data using Marmoset Gene 1.0 ST Array. While reading the CEL file into R environment, error message is showing as "Library - package margene10stcdf not installed" 

How to install the package MarGene-1_0st package into R environment? The R script is attached for your reference.

The part No of the array is 901961.

 -- output of sessionInfo(): 

> library(affy)
> eset.rma <- justRMA(celfile.path="C:/Dhanjit/Marmoset-Dr Uddhav/CEL FILE/")
Error in getCdfInfo(object) : 
  Could not obtain CDF environment, problems encountered:
Specified environment does not contain MarGene-1_0-st
Library - package margene10stcdf not installed
Bioconductor - margene10stcdf not available


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