[BioC] Error: package \'mzR\' could not be loaded

Siebolt de Boer [guest] guest at bioconductor.org
Fri Sep 13 12:47:24 CEST 2013


Problem installing metaXCMS for Windows.

 -- output of sessionInfo(): 

After a few days trying to get metaXCMS working it didn't succeed.

The problem is loading of a mzR ? There is a different version of Rcpp ?

I hope someone can help me with this problem ?

Thank you already for your help.

Best, Wishes, Siebolt.

> library(metaXCMS)
Loading required package: cairoDevice
Loading required package: RGtk2
Loading required package: Biobase
Loading required package: BiocGenerics

Attaching package: ‘BiocGenerics’

The following object(s) are masked from ‘package:stats’:

xtabs

The following object(s) are masked from ‘package:base’:

anyDuplicated, cbind, colnames, duplicated, eval, Filter, Find, get, intersect, lapply, Map, mapply, mget, order, paste, pmax, pmax.int, pmin, pmin.int, Position, rbind, Reduce, rep.int, rownames, sapply,
setdiff, table, tapply, union, unique

Welcome to Bioconductor

Vignettes contain introductory material; view with 'browseVignettes()'. To cite Bioconductor, see 'citation("Biobase")', and for packages 'citation("pkgname")'.

Loading required package: xcms
Loading required package: mzR
Loading required package: Rcpp
Error : .onLoad failed in loadNamespace() for 'mzR', details:
call: value[[3L]](cond)
error: failed to load module Ramp from package mzR
object '.setDummyField' not found
In addition: Warning messages:
1: package ‘Rcpp’ was built under R version 3.0.1 
2: In fun(libname, pkgname) :
mzR has been built against a different Rcpp version
than is installed on your system. This might lead to errors
when loading mzR. If you encounter such issues, please send
a report, including the output of sessionInfo() to the Bioc
mailing list -- http://www.bioconductor.org/help/mailing-list.
Error: package ‘mzR’ could not be loaded
> license()

This software is distributed under the terms of the GNU General
Public License, either Version 2, June 1991 or Version 3, June 2007.
The terms of version 2 of the license are in a file called COPYING
which you should have received with
this software and which can be displayed by RShowDoc("COPYING").
Version 3 of the license can be displayed by RShowDoc("GPL-3").

Copies of both versions 2 and 3 of the license can be found
at http://www.R-project.org/Licenses/.

A small number of files (the API header files listed in
R_DOC_DIR/COPYRIGHTS) are distributed under the
LESSER GNU GENERAL PUBLIC LICENSE, version 2.1 or later.
This can be displayed by RShowDoc("LGPL-2.1"),
or obtained at the URI given.
Version 3 of the license can be displayed by RShowDoc("LGPL-3").

'Share and Enjoy.'

> sessionInfo()
R version 2.15.3 (2013-03-01)
Platform: i386-w64-mingw32/i386 (32-bit)

locale:
[1] LC_COLLATE=English_United States.1252 LC_CTYPE=English_United States.1252 LC_MONETARY=English_United States.1252 LC_NUMERIC=C LC_TIME=English_United States.1252 

attached base packages:
[1] stats graphics grDevices utils datasets methods base 

other attached packages:
[1] Rcpp_0.10.4 Biobase_2.18.0 BiocGenerics_0.4.0 RGtk2_2.20.25 cairoDevice_2.19 BiocInstaller_1.8.3

loaded via a namespace (and not attached):
[1] tools_2.15.3

--
Sent via the guest posting facility at bioconductor.org.



More information about the Bioconductor mailing list