[BioC] cycle package question

Steve Lianoglou lianoglou.steve at gene.com
Tue Sep 17 14:50:08 CEST 2013


Hi,

On Tue, Sep 17, 2013 at 2:21 AM, Alyaa Mahmoud <alyamahmoud at gmail.com> wrote:
> Dear BioC group
>
> Is there a way we can apply the function fdrfourier to an expression matrix
> directly and not necessarily an expressionSet object ?? Please advise

I'm not aware of the `fdrfourrier` function (what package is it in?)
but if you want to apply it on an ExpressionSet but the function
itself only accepts a matrix and if `e` is your ExpressionSet, can't
you just `fdrfourrier(exprs(e))`?

-steve

-- 
Steve Lianoglou
Computational Biologist
Bioinformatics and Computational Biology
Genentech



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