[BioC] simulating genetic data

[James W. MacDonald]

Hi Hermann,

Plink will do that:

http://pngu.mgh.harvard.edu/~purcell/plink/simulate.shtml

It also seems like GCTA will do so as well:

http://www.complextraitgenomics.com/software/gcta/Simu.html

Best,

Jim



On Sunday, September 29, 2013 10:38:24 AM, Hermann Norpois wrote:
> Hello,
>
> I am looking for a tool that simulates gwa-data for a quantitative trait. I
> would like to have a matrix with 0,1,2 for the number of minor allels for
> about 200000 snps (e.g. in columns) and the phenotypes (the quantitative
> trait) in rows.
> Can anybody give me a hint?
> Thanks
> Hermann
>
> 	[[alternative HTML version deleted]]
>
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--
James W. MacDonald, M.S.
Biostatistician
University of Washington
Environmental and Occupational Health Sciences
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