[BioC] phyloseq/DESeq gives negative transformed values
Sophie Josephine Weiss
Sophie.Weiss at colorado.edu
Sun Apr 13 23:17:35 CEST 2014
I have microbiome data with no replicates, from different conditions. I am
trying to transform the data using the DESeq method, as described in
McMurdie and Holmes 2014.
The attached file is the definition I am using, as per the supplemental
info in McMurdie and Holmes 2014, and the .biom file I am using.
Thank you for your help,
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