[BioC] CAGEr - How to change plot axis range in CAGEr

Tobias Hohenauer hohenauer at brain.riken.jp
Fri Aug 1 10:53:48 CEST 2014


Dear all,

when using the functions

 > quantilePositions(cage.all, clusters = "tagClusters", qLow = 0.1, qUp 
= 0.9)
 > plotInterquantileWidth(cage.all, clusters = "tagClusters", 
tpmThreshold = 10, qLow = 0.1, qUp = 0.9)

in the package CAGEr, I would like to adjust the range of the x-axis, 
which I believe is somehow set to a fixed 150 bp. If I was to change 
that to 100 bp for example, how would that work?

Thank you very much for your help!

Best,

Tobias

-- 
Tobias Hohenauer, PhD
GCNA, Disease Mechanism Research Core
RIKEN Brain Science Institute
2-1 Hirosawa, Wako-shi
351-0198 Japan



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