[BioC] GWASTools: assocTestRegression, forcing the analysis to use reference allele

Danica Fabrigar danica_714 at hotmail.com
Thu Aug 14 10:39:11 CEST 2014

Hi Stephanie,

Thank you for your advice.

Indeed as you have said it is easy enough to alter the results to suit the allele of interest. However I was asking the question mostly in the context of a dataset involving thousands of SNPs where doing this alteration would require a bit of extra coding. 


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