[BioC] BiSeq - readBismark error

[Katja Hebestreit]

Hi David,

I assme that the new version is going to be available within 24 hours. Of
course, it is available on SVN already.

Best,
Katja

David Iles schrieb am 2014-02-05:
> Hi,

> Thanks for the warning. When will the BiSeq 1.2.4 package be
> available? I’m about to start a methylation analysis ….

> Dr David Iles
> Visiting Research Fellow
> School of Biology
> University of Leeds
> Leeds LS2 9JT
> UK
> d.e.iles at leeds.ac.uk<mailto:d.e.iles at leeds.ac.uk>






> On 5 Feb 2014, at 17:29, Hans-Ulrich Klein
> <h.klein at uni-muenster.de<mailto:h.klein at uni-muenster.de>> wrote:

> Dear all,

> We would like to inform users of the BiSeq package, that there was in
> error in the readBismark() function that may - depending on the files
> and the order they were read in - lead to false methylation values.
> Affected BiSeq versions are 1.2.0 to 1.2.3.  If you have used one of
> these versions to read in Bismark output, we suggest to update to
> version 1.2.4 and compare the obtained methylation values. I am
> really
> sorry for this.

> Best regards,
> Hans

> --
> Dr. Hans-Ulrich Klein
> Institute of Medical Informatics
> University of Münster
> Albert-Schweitzer-Campus 1
> Gebäude A11
> 48149 Münster, Germany
> Tel.: +49 (0)251 83-58405

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