[BioC] mzR installation

gtsiliki at bioacademy.gr gtsiliki at bioacademy.gr
Mon Feb 10 15:01:31 CET 2014


Hello,

I'm trying to install the Risa package at R 3.0.2 but there seems to be a
problem with mzR installation.
Particularly,  >library(mzR) produces the following error message:

Loading required package: Rcpp
Error : .onLoad failed in loadNamespace() for 'mzR', details:
  call: value[[3L]](cond)
  error: failed to load module Ramp from package mzR
value of 'SET_ATTRIB' must be a pairlist or NULL, not a 'character'
In addition: Warning message:
In fun(libname, pkgname) :
  mzR has been built against a different Rcpp version (0.10.5)
than is installed on your system (0.11.0). This might lead to errors
when loading mzR. If you encounter such issues, please send
a report, including the output of sessionInfo() to the Bioc
mailing list -- http://www.bioconductor.org/help/mailing-list.
Error: package or namespace load failed for ‘mzR’

> sessionInfo()
R version 3.0.2 (2013-09-25)
Platform: x86_64-apple-darwin10.8.0 (64-bit)

locale:
[1] en_GB.UTF-8/en_GB.UTF-8/en_GB.UTF-8/C/en_GB.UTF-8/en_GB.UTF-8

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base

other attached packages:
[1] Rcpp_0.11.0          BiocInstaller_1.12.0

loaded via a namespace (and not attached):
[1] Biobase_2.22.0     BiocGenerics_0.8.0 parallel_3.0.2     tools_3.0.2


Installing Rcpp 0.10.5 is the way around this?

Thanks in advance,
Georgia



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