[BioC] miRBase

Shantanu Karkare [guest] guest at bioconductor.org
Mon Jan 6 13:56:34 CET 2014



Hi,

I have been trying to install miRBase db using the following command in R 3.0.2.

source("http://bioconductor.org/biocLite.R")
biocLite("mirbase.db")

But I am receiving the following error:

Error in file (filename, "r", encoding = encoding):
   can not open connection
In addition: Warning message:
In file (filename, "r", encoding = encoding):
   can 'bioconductor.org' not dissolve
> BiocLite ()
Error: Could function "biocLite" can not find

I was wondering if there is problem to install the package.

Thank you for your help.

Kind regards,
Shan

 -- output of sessionInfo(): 

R version 3.0.2 (2013-09-25)
Platform: x86_64-w64-mingw32/x64 (64-bit)

locale:
[1] LC_COLLATE=German_Switzerland.1252  LC_CTYPE=German_Switzerland.1252   
[3] LC_MONETARY=German_Switzerland.1252 LC_NUMERIC=C                       
[5] LC_TIME=German_Switzerland.1252    

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
[1] BiocInstaller_1.12.0

loaded via a namespace (and not attached):
[1] tools_3.0.2


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