[BioC] Rbowtie - compilation error

[Michael Stadler]

Thanks Martin for notifying!
Michael

On 04.06.2014 13:22, Martin Morgan wrote:
> Please remember to include the package maintainer in mail about
> individual packages. The maintainer is available from the package
> 'landing page'
> 
>   http://bioconductor.org/packages/release/bioc/html/Rbowtie.html
> 
> and is cc'd here.
> 
> There is another Rbowtie issue reported on StackOverflow
> 
>    http://stackoverflow.com/questions/24016722
> 
> and
> 
>   https://stat.ethz.ch/pipermail/bioconductor/2014-June/059913.html
> 
> On 06/04/2014 12:20 AM, Romain [guest] wrote:
>> Hi,
>>
>> I'm trying to install "Rbowtie" package, following the instructions
>> here : http://bioconductor.org/packages/2.12/bioc/html/Rbowtie.html
>>
>> When I run the command, I got this error message :
>> http://pastebin.com/DkEdCV05
>>
>> I'm currently running on Ubuntu 12.4 LTS and all others packages seems
>> to work well. I updated gcc and g++ to the last version aviable.
>> May you help me to identify the problem ?
>>
>> Thanks.
>>
>>   -- output of sessionInfo():
>>
>> R version 3.1.0 (2014-04-10)
>> Platform: i686-pc-linux-gnu (32-bit)
>>
>> locale:
>>   [1] LC_CTYPE=fr_FR.UTF-8       LC_NUMERIC=C
>>   [3] LC_TIME=fr_FR.UTF-8        LC_COLLATE=fr_FR.UTF-8
>>   [5] LC_MONETARY=fr_FR.UTF-8    LC_MESSAGES=fr_FR.UTF-8
>>   [7] LC_PAPER=fr_FR.UTF-8       LC_NAME=C
>>   [9] LC_ADDRESS=C               LC_TELEPHONE=C
>> [11] LC_MEASUREMENT=fr_FR.UTF-8 LC_IDENTIFICATION=C
>>
>> attached base packages:
>> [1] stats     graphics  grDevices utils     datasets  methods   base
>>
>> other attached packages:
>> [1] BiocInstaller_1.14.2
>>
>> loaded via a namespace (and not attached):
>> [1] tools_3.1.0
>>
>>
>> -- 
>> Sent via the guest posting facility at bioconductor.org.
>>
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> 
>