[BioC] loading qvalue library causes R to abort

Dan Tenenbaum dtenenba at fhcrc.org
Sat Jun 28 04:09:13 CEST 2014

Hi Kim,

----- Original Message -----
> From: "Kim S [guest]" <guest at bioconductor.org>
> To: bioconductor at r-project.org, kims at usc.edu
> Cc: "qvalue Maintainer" <jstorey at princeton.edu>
> Sent: Friday, June 27, 2014 6:55:34 PM
> Subject: [BioC] loading qvalue library causes R to abort
> I am having trouble with the qvalue package.
> When I type
> library(qvalue)
> I get the following error:
> "To open "rsession", you need to install X11. Would you like to
> install X11 now? X11 is no longer included with the OS X. Apple
> continues to support the development of X11 on OS X with the open
> source community. Clicking "continue" will take you to an Apple
> Knowledge Base Article which provides information about installing
> X11.

You can click continue to read more about the problem. In a nutshell you need to install XQuartz from http://xquartz.macosforge.org/landing/ , log out and log back in, and then you should be able to load qvalue.


> thanks for any help.
>  -- output of sessionInfo():
> R version 3.1.0 (2014-04-10)
> Platform: x86_64-apple-darwin10.8.0 (64-bit)
> --
> Sent via the guest posting facility at bioconductor.org.
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