[BioC] Is there solution to offline running Bioconductor limma

Dan Tenenbaum dtenenba at fhcrc.org
Sun Mar 23 20:13:03 CET 2014



----- Original Message -----
> From: "prabhakar ghorpade" <prabhakar_ghorpade at yahoo.co.in>
> To: bioconductor at r-project.org
> Sent: Sunday, March 23, 2014 1:07:57 AM
> Subject: [BioC] Is there solution to offline running Bioconductor limma
> 
> Hello,
>        Is there solution to offline running Bioconductor in R? For
>        example I want to run Bioconductor package limma offline for
>        that each time it ask for other dependency packages for which
>        I need to download them from online site. Is it possible to
>        download all dependencies for particular packages at once to
>        run them offline. Thanks.
> 


source("http://bioconductor.org/biocLite.R")
biocLite("limma")

This will install limma and all its dependencies. You only need to do this once. 

Then when you want to use limma, do this:

library(limma)

Dan


> Regards,
> Prabhakar
>  
> Dr. Ghorpade Prabhakar B.
> PhD Scholar ( Veterinary Biochemistry),
> IVRI,
> Izatnagar,
> Bareilly, U.P.,
> India
> 	[[alternative HTML version deleted]]
> 
> 
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