lianoglou.steve at gene.com
Mon Mar 24 17:22:39 CET 2014
First: please keep all correspondence on-list (by replying with
"Reply-All") so that other can help as well as benefit from discussion.
Other comments inline:
On 24 Mar 2014, at 6:32, Huma Asif wrote:
> i have read that just but i have to get my machine ready first so i
> can apply the instruction in that
> i am doing this and got this message
> Warning messages:
> 1: package ‘SomaticSignatures’ is not available (for R version
It looks like this package is only available in bioc-devel, which has
not been released yet.
How would you have known?
It will be released sometime in April (I believe) after R-3.1.x is
released. In order for you to install SomaticSignatures via biocLite,
you have to first install the current development version of R-3.1.
> 2: installed directory not writable, cannot update packages 'foreign',
> 'KernSmooth', 'rpart', 'spatial'
It also looks like you are running R as a user who does not have rights
to install into the default package directory. You can either run R as
administrator account, or setup a package directory in your home
directory that R can use "on top of" the default install. To figure out
how to do that, google "r_libs_user"
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