<html>
<body>
You could create your own plotting routine by<br><br>
myImage=edit(maImage)<br><br>
In the editor, you can comment out the "par" line in
maImage.<br><br>
However, I have found that even for a 2 x 2 grid of plots, with bar=T the
plots are very scrunched. I think that you can get around this by
careful use of the various par options that allow you to define your own
plot sizes and locations, but it will likely take a bit of
experimentation. <br><br>
If you do decide to do the work of laying out the plots, please post your
solution to the list.<br><br>
--Naomi<br><br>
At 04:18 AM 1/20/2004, Foata,Francis,LAUSANNE,NRC/N&H
wrote:<br><br>
<blockquote type=cite class=cite cite><font size=2>Hi,</font> <br>
<font size=2>With Bar=F it's works. But is there a way to obtained the
four plots WITH the Bar ?</font> <br>
<font size=2>I've tried with split.screen but it does not work</font>
<br><br>
<font size=2>F</font> <br><br>
<font size=2>-----Original Message-----</font> <br>
<font size=2>From: Naomi Altman [<a href="mailto:naomi@stat.psu.edu">mailto:naomi@stat.psu.edu</a>]</font> <br>
<font size=2>Sent: lundi, 19. janvier 2004 18:35</font> <br>
<font size=2>To: Sean Davis; Foata,Francis,LAUSANNE,NRC/N&H;</font> <br>
<font size=2>bioconductor@stat.math.ethz.ch</font> <br>
<font size=2>Subject: Re: [BioC] [maImage: Draw multiple spatial plots on the SAME</font> <br>
<font size=2>graph]</font> <br><br>
<font size=2>This question arose earlier on this list.</font> <br><br>
<font size=2>par(mfrow= ) does not work unless you also use "bar=F" in maImage, because </font><br>
<font size=2>there is a par command in maImage.</font> <br><br>
<font size=2>e.g.</font> <br><br>
<font size=2>par(mfrow=c(2,3))</font> <br><br>
<font size=2>maImage(fdata[,1],x="maGb",bar=F)</font> <br>
<font size=2>maImage(data[,1],x="maRb",bar=F)</font> <br>
<font size=2>maImage(data[,1],x="maM",bar=F)</font> <br>
<font size=2>maImage(data[,1],x="maGf",bar=F)</font> <br>
<font size=2>maImage(data[,1],x="maRf",bar=F)</font> <br><br>
<br><br>
<font size=2>At 10:52 AM 1/19/2004, Sean Davis wrote:</font> <br>
<font size=2>>Prior to the plots, give the command:</font> <br>
<font size=2>></font> <br>
<font size=2>>par(mfrow=c(2,2))</font> <br>
<font size=2>></font> <br>
<font size=2>>See ?par for more information.</font> <br>
<font size=2>></font> <br>
<font size=2>>Sean</font> <br>
<font size=2>>----- Original Message -----</font> <br>
<font size=2>>From: "Foata,Francis,LAUSANNE,NRC/N&H" <francis.foata@rdls.nestle.com></font> <br>
<font size=2>>To: <bioconductor@stat.math.ethz.ch></font> <br>
<font size=2>>Sent: Monday, January 19, 2004 9:28 AM</font> <br>
<font size=2>>Subject: [BioC] [maImage: Draw multiple spatial plots on the SAME graph]</font> <br>
<font size=2>></font> <br>
<font size=2>></font> <br>
<font size=2>> > Hello,</font> <br>
<font size=2>> ></font> <br>
<font size=2>> > I have a stupid problem: I want to draw four spatial plots on the SAME</font> <br>
<font size=2>> > graph. Here is the R code I've tried but it does not work :</font> <br>
<font size=2>> ></font> <br>
<font size=2>> > par(mfrow=c(2,2))</font> <br>
<font size=2>> > maImage(christian.raw[,1], x="maGf")</font> <br>
<font size=2>> > maImage(christian.raw[,1], x="maGb")</font> <br>
<font size=2>> > maImage(christian.raw[,1], x="maRf")</font> <br>
<font size=2>> > maImage(christian.raw[,1], x="maRb")</font> <br>
<font size=2>> ></font> <br>
<font size=2>> > The plots are drawn one after the other</font> <br>
<font size=2>> ></font> <br>
<font size=2>> > Does someone know how to handle this problem ?</font> <br>
<font size=2>> ></font> <br>
<font size=2>> > Thanks,</font> <br>
<font size=2>> ></font> <br>
<font size=2>> > Francis</font> <br>
<font size=2>> ></font> <br>
<font size=2>> > [[alternative HTML version deleted]]</font> <br>
<font size=2>> ></font> <br>
<font size=2>> > _______________________________________________</font> <br>
<font size=2>> > Bioconductor mailing list</font> <br>
<font size=2>> > Bioconductor@stat.math.ethz.ch</font> <br>
<font size=2>> > <a href="https://www.stat.math.ethz.ch/mailman/listinfo/bioconductor">https://www.stat.math.ethz.ch/mailman/listinfo/bioconductor</a></font> <br>
<font size=2>> ></font> <br>
<font size=2>></font> <br>
<font size=2>>_______________________________________________</font> <br>
<font size=2>>Bioconductor mailing list</font> <br>
<font size=2>>Bioconductor@stat.math.ethz.ch</font> <br>
<font size=2>><a href="https://www.stat.math.ethz.ch/mailman/listinfo/bioconductor">https://www.stat.math.ethz.ch/mailman/listinfo/bioconductor</a></font> <br><br>
<font size=2>Naomi S. Altman 814-865-3791 (voice)</font> <br>
<font size=2>Associate Professor</font> <br>
<font size=2>Bioinformatics Consulting Center</font> <br>
<font size=2>Dept. of Statistics 814-863-7114 (fax)</font> <br>
<font size=2>Penn State University 814-865-1348 (Statistics)</font> <br>
<font size=2>University Park, PA 16802-2111</font> </blockquote>
<x-sigsep><p></x-sigsep>
Naomi S. Altman 814-865-3791 (voice) <br>
Associate Professor <br>
Bioinformatics Consulting Center<br>
Dept. of Statistics 814-863-7114 (fax) <br>
Penn State University 814-865-1348 (Statistics) <br>
University Park, PA 16802-2111<br>
</body>
</html>