On 17 Sep 2014, at 17:04 , Ben Bolker <bbolker at gmail.com> wrote:
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> I am painfully aware that this is most likely a problem with my
> system, but I am nevertheless going to ask if anyone has any
> ideas/suggestions for diagnosis and trouble-shooting.
>
Others have been seeing this since r66622, so I think you're just suffering the "unsuffered consequences" (unsuffered by regular users, that is; people who run development versions will suffer occasionally). Just hang on for a while.
> - From a clean checkout of release 66624 on Ubuntu 12.04 (32-bit, sorry!):
That's _revision_ 66624, please. It is only "released" in the sense that it isn't kept secret.
-pd
> gcc (Ubuntu/Linaro 4.6.4-1ubuntu1~12.04) 4.6.4
>
> svn checkout https://svn.r-project.org/R/trunk/
> tools/rsync-recommended
>
> cd ../r-build
> ../r-devel/configure
>
> R is now configured for i686-pc-linux-gnu
>
> Source directory: ../r-devel
> Installation directory: /usr/local
>
> C compiler: gcc -std=gnu99 -g -O2
> Fortran 77 compiler: gfortran -g -O2
>
> C++ compiler: g++ -g -O2
> C++ 11 compiler: g++ -std=c++0x -g -O2
> Fortran 90/95 compiler: gfortran -g -O2
> Obj-C compiler:
>
> Interfaces supported: X11, tcltk
> External libraries: readline, lzma
> Additional capabilities: PNG, JPEG, TIFF, NLS, cairo
> Options enabled: shared BLAS, R profiling
>
> Capabilities skipped: ICU
> Options not enabled: memory profiling
>
> make fails at:
>
> byte-compiling 'methods'
> initializing class and method definitions ...Error: .onLoad failed in
> loadNamespace() for 'methods', details:
> call: new("classRepresentation")
> error: could not find function "isVirtualClass"
>
> The only other oddity of my system/potential clue is that symbolic
> links sometimes behave strangely because I am working on a VirtualBox
> virtual machine with a virtual Linux filesystem layered over an HGFS
> filesystem.
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--
Peter Dalgaard, Professor,
Center for Statistics, Copenhagen Business School
Solbjerg Plads 3, 2000 Frederiksberg, Denmark
Phone: (+45)38153501
Email: pd.mes at cbs.dk Priv: PDalgd at gmail.com