[Rd] compile failure for R-devel

Therneau, Terry M., Ph.D. therne@u @end|ng |rom m@yo@edu
Mon Jan 17 19:06:57 CET 2022

I reran my usual steps to update R this AM, preparatory to doing checks on the rpart 
package.  (I had made changes from Free to R_Free, requested by Brian R.)   However, the 
process fails:

  svn up

The make finishes with the following:

gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include 
-DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include  -fvisibility=hidden -fpic  -g 
-O2  -c http.c -o http.o
gcc -shared -L/usr/local/lib -o tools.so text.o init.o Rmd5.o md5.o signals.o install.o 
getfmts.o http.o gramLatex.o gramRd.o pdscan.o
make[6]: Leaving directory '/usr/local/src/R-devel/src/library/tools/src'
make[5]: Leaving directory '/usr/local/src/R-devel/src/library/tools/src'
make[4]: Leaving directory '/usr/local/src/R-devel/src/library/tools'
make[4]: Entering directory '/usr/local/src/R-devel/src/library/tools'
installing 'sysdata.rda'
Error: 'hashtab' is not an exported object from 'namespace:utils'
Execution halted
make[4]: *** [../../../share/make/basepkg.mk:151: sysdata] Error 1
make[4]: Leaving directory '/usr/local/src/R-devel/src/library/tools'
make[3]: *** [Makefile:36: all] Error 2
make[3]: Leaving directory '/usr/local/src/R-devel/src/library/tools'
make[2]: *** [Makefile:37: R] Error 1
make[2]: Leaving directory '/usr/local/src/R-devel/src/library'
make[1]: *** [Makefile:28: R] Error 1
make[1]: Leaving directory '/usr/local/src/R-devel/src'
make: *** [Makefile:61: R] Error 1--

 > sessionInfo()
R Under development (unstable) (2022-01-17 r81511)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu 20.04.3 LTS

Matrix products: default
BLAS:   /usr/local/src/R-devel/lib/libRblas.so
LAPACK: /usr/local/src/R-devel/lib/libRlapack.so

  [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C
  [3] LC_TIME=en_US.UTF-8        LC_COLLATE=C
  [7] LC_PAPER=en_US.UTF-8       LC_NAME=C
  [9] LC_ADDRESS=C               LC_TELEPHONE=C

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods base

loaded via a namespace (and not attached):
[1] compiler_4.2.0

Any hints?


Terry M Therneau, PhD
Department of Quantitative Health Sciences
Mayo Clinic
therneau using mayo.edu

"TERR-ree THUR-noh"

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