[R] mean and sd of each serial position

Thomas Lumley thomas at biostat.washington.edu
Fri Oct 16 20:32:28 CEST 1998


On Fri, 16 Oct 1998, Bill Simpson wrote:

> I want to do something like this in R. If I have three vectors
> > a1
> [1] 1 2 3
> > a2
> [1] 4 5 6
> > a3
> [1] 9 10 7
> 
> I want to compute
> 1. A vector that is the mean at each serial position of a1, a2, and a3.
> so in this example it would have the contents
> 4.667, 5.667, 5.333333
> 
> 2. A vector that is the SD at each serial position of a1, a2, and a3.
> so in this example it would have the contents
>  4.041452, 4.041452, 2.081666
> 
> Can anyone tell me a good way to do this in R? The only thing I can come
> up with is

Use apply():

cbind(a1,a2,a3) makes matrix

apply(cbind(a1,a2,a3),1,mean) computes the mean of each row of the matrix

In general you can do

    meanvec<-function (...) 
     	apply(cbind(...), 1, mean)

and then 
R> a1<-1:10  
R> a2<-2:11
R> a3<-3:12
R> meanvec(a1,a2,a3)
 [1]  2  3  4  5  6  7  8  9 10 11

This doesn't check that all the vectors are the same length. A more
sophisticated version is 
meanvec<-function (...) {
 if (length(unique(sapply(list(...),length)))!=1)
        stop("not all same length")
 apply(cbind(...), 1, mean)
}

R> meanvec(a1,a2,a3)     
 [1]  2  3  4  5  6  7  8  9 10 11
R> a4<-1:3
R> meanvec(a1,a2,a3,a4)
Error: not all same length


Thomas Lumley
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