[R] problems compiling R-0.63.3 and 0.64.0 on alpha

a.o.jaunsen@astro.uio.no a.o.jaunsen at astro.uio.no
Fri Apr 30 10:56:37 CEST 1999


I have problems compiling R (both 0.63.3 and 0.64.0) on a DEC-UX 4.0E alpha
(ev6) as illustrated in the enclosed log. I have tried adding the suggestions
given in PLATFORMS, without any significant improvement...

I have included the config.cache aswell.

Any suggestions on how to solve this ?

Thanx!

Andreas

~~~~~~~~~~~~~
.
.
.
gcc -ieee_with_inexact -g -O2 -I../include -I../../src/include  -c subset.c -o 
subset.o
gcc -ieee_with_inexact -g -O2 -I../include -I../../src/include  -c summary.c 
-o summary.o
gcc -ieee_with_inexact -g -O2 -I../include -I../../src/include  -c unique.c -o 
unique.o
gcc -ieee_with_inexact -g -O2 -I../include -I../../src/include  -c util.c -o 
util.o
gcc -ieee_with_inexact -g -O2 -I../include -I../../src/include  -c version.c 
-o version.o
mkdir ../../bin
f77  -o ../../bin/R.binary arithmetic.o array.o attrib.o bind.o builtin.o 
character.o coerce.o colors.o complex.o context.o cov.o cum.o debug.o 
deparse.o deriv.o devices.o dotcode.o dstruct.o duplicate.o envir.o errors.o 
eval.o format.o fourier.o gram.o graphics.o iosupport.o list.o logic.o main.o 
match.o memory.o model.o names.o objects.o optimize.o options.o par.o paste.o 
plot.o plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o 
random.o relop.o saveload.o scan.o seq.o sort.o source.o split.o subassign.o 
subscript.o subset.o summary.o unique.o util.o version.o ../unix/libunix.a 
../appl/libappl.a ../nmath/libmath.a -lSM -lICE -L/local/X11R5/lib -lX11 
-ldnet_stub -ldxml  -ltermcap -lm
ld:
../unix/libunix.a(system.o): main: multiply defined
fort: Severe: Failed while trying to link.
make[2]: *** [../../bin/R.binary] Error 1
make[2]: Leaving directory `/mn/vega/astro/local/src/rstat/R-0.63.3/src/main'
make[1]: *** [R] Error 1
make[1]: Leaving directory `/mn/vega/astro/local/src/rstat/R-0.63.3/src'
make: *** [R] Error 1

-------------- next part --------------
# This file is a shell script that caches the results of configure
# tests run on this system so they can be shared between configure
# scripts and configure runs.  It is not useful on other systems.
# If it contains results you don't want to keep, you may remove or edit it.
#
# By default, configure uses ./config.cache as the cache file,
# creating it if it does not exist already.  You can give configure
# the --cache-file=FILE option to use a different cache file; that is
# what configure does when it calls configure scripts in
# subdirectories, so they share the cache.
# Giving --cache-file=/dev/null disables caching, for debugging configure.
# config.status only pays attention to the cache file if you give it the
# --recheck option to rerun configure.
#
ac_cv_c_const=${ac_cv_c_const='yes'}
ac_cv_func___setfpucw=${ac_cv_func___setfpucw='no'}
ac_cv_func_acosh=${ac_cv_func_acosh='yes'}
ac_cv_func_asinh=${ac_cv_func_asinh='yes'}
ac_cv_func_atanh=${ac_cv_func_atanh='yes'}
ac_cv_func_bcopy=${ac_cv_func_bcopy='yes'}
ac_cv_func_connect=${ac_cv_func_connect='yes'}
ac_cv_func_finite=${ac_cv_func_finite='yes'}
ac_cv_func_gethostbyname=${ac_cv_func_gethostbyname='yes'}
ac_cv_func_isnan=${ac_cv_func_isnan='yes'}
ac_cv_func_matherr=${ac_cv_func_matherr='no'}
ac_cv_func_memcpy=${ac_cv_func_memcpy='yes'}
ac_cv_func_memmove=${ac_cv_func_memmove='yes'}
ac_cv_func_regcomp=${ac_cv_func_regcomp='yes'}
ac_cv_func_remove=${ac_cv_func_remove='yes'}
ac_cv_func_rint=${ac_cv_func_rint='yes'}
ac_cv_func_shmat=${ac_cv_func_shmat='yes'}
ac_cv_func_strcoll=${ac_cv_func_strcoll='yes'}
ac_cv_func_strtod=${ac_cv_func_strtod='yes'}
ac_cv_func_strtol=${ac_cv_func_strtol='yes'}
ac_cv_func_system=${ac_cv_func_system='yes'}
ac_cv_func_times=${ac_cv_func_times='yes'}
ac_cv_func_vfork_works=${ac_cv_func_vfork_works='yes'}
ac_cv_func_vprintf=${ac_cv_func_vprintf='yes'}
ac_cv_have_x=${ac_cv_have_x='have_x=yes 		ac_x_includes= ac_x_libraries=/local/X11R5/lib'}
ac_cv_header_dl_h=${ac_cv_header_dl_h='no'}
ac_cv_header_dlfcn_h=${ac_cv_header_dlfcn_h='yes'}
ac_cv_header_elf_h=${ac_cv_header_elf_h='no'}
ac_cv_header_hdf5_h=${ac_cv_header_hdf5_h='no'}
ac_cv_header_ieee754_h=${ac_cv_header_ieee754_h='no'}
ac_cv_header_ieeefp_h=${ac_cv_header_ieeefp_h='no'}
ac_cv_header_locale_h=${ac_cv_header_locale_h='yes'}
ac_cv_header_readline_history_h=${ac_cv_header_readline_history_h='no'}
ac_cv_header_rpc_xdr_h=${ac_cv_header_rpc_xdr_h='yes'}
ac_cv_header_stdc=${ac_cv_header_stdc='yes'}
ac_cv_header_sys_times_h=${ac_cv_header_sys_times_h='yes'}
ac_cv_header_time_h=${ac_cv_header_time_h='yes'}
ac_cv_header_unistd_h=${ac_cv_header_unistd_h='yes'}
ac_cv_header_vfork_h=${ac_cv_header_vfork_h='no'}
ac_cv_lib_ICE_IceConnectionNumber=${ac_cv_lib_ICE_IceConnectionNumber='yes'}
ac_cv_lib_dl_dlopen=${ac_cv_lib_dl_dlopen='no'}
ac_cv_lib_dnet_dnet_ntoa=${ac_cv_lib_dnet_dnet_ntoa='no'}
ac_cv_lib_dnet_stub_dnet_ntoa=${ac_cv_lib_dnet_stub_dnet_ntoa='yes'}
ac_cv_lib_dxml_main=${ac_cv_lib_dxml_main='yes'}
ac_cv_lib_hdf5_main=${ac_cv_lib_hdf5_main='no'}
ac_cv_lib_m_sin=${ac_cv_lib_m_sin='yes'}
ac_cv_lib_moto_sin=${ac_cv_lib_moto_sin='no'}
ac_cv_lib_ncurses_main=${ac_cv_lib_ncurses_main='no'}
ac_cv_lib_readline_rl_callback_read_char=${ac_cv_lib_readline_rl_callback_read_char='no'}
ac_cv_lib_termcap_main=${ac_cv_lib_termcap_main='yes'}
ac_cv_lib_z_main=${ac_cv_lib_z_main='yes'}
ac_cv_path_DVIPS=${ac_cv_path_DVIPS='/usr/local/bin/dvips'}
ac_cv_path_F77=${ac_cv_path_F77='/bin/f77'}
ac_cv_path_LATEX=${ac_cv_path_LATEX='/usr/local/bin/latex'}
ac_cv_path_MAKEINDEX=${ac_cv_path_MAKEINDEX='/astro/local/bin/makeindex'}
ac_cv_path_PERL=${ac_cv_path_PERL='/usr/local/bin/perl5'}
ac_cv_path_XMKMF=${ac_cv_path_XMKMF='/local/X11R5/bin/xmkmf'}
ac_cv_path_install=${ac_cv_path_install='/bin/installbsd -c'}
ac_cv_prog_AR=${ac_cv_prog_AR='ar'}
ac_cv_prog_CC=${ac_cv_prog_CC='gcc'}
ac_cv_prog_CPP=${ac_cv_prog_CPP='gcc -E'}
ac_cv_prog_LN_S=${ac_cv_prog_LN_S='ln -s'}
ac_cv_prog_RANLIB=${ac_cv_prog_RANLIB='ranlib'}
ac_cv_prog_R_PRINTCMD=${ac_cv_prog_R_PRINTCMD='lpr'}
ac_cv_prog_cc_cross=${ac_cv_prog_cc_cross='no'}
ac_cv_prog_cc_g=${ac_cv_prog_cc_g='yes'}
ac_cv_prog_cc_works=${ac_cv_prog_cc_works='yes'}
ac_cv_prog_gcc=${ac_cv_prog_gcc='yes'}
ac_cv_sizeof_long=${ac_cv_sizeof_long='8'}
ac_cv_type_pid_t=${ac_cv_type_pid_t='yes'}
ac_cv_type_signal=${ac_cv_type_signal='void'}


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