[R] Anova

Luis Silva lm.silva at sapo.pt
Thu Dec 12 19:46:03 CET 2002


Hi,

I have a microarray matrix 3000x70 for example (genes x 
experiments). This data has more than 2 classes. I would like 
to make some filtering on the genes. For example, I would like 
to exclude genes with the same mean expression across all 
classes. This is a problem of ANOVA

H0:mu1=mu2=...=muk
H1: at least one is different

First question: Do you think Anova is reasonable for this?
Second question. How can I do this with R?
Clearly, I'll have to make some loop to apply this operation to 
all the genes.

Thanks

Luis

--
A nossa prenda de Natal:  Kit SAPO.ADSL.PT agora a 0 € e Tráfego Ilimitado. Só até 31 de Dezembro. 
Adira já em http://www.sapo.pt/kitadslgratis




More information about the R-help mailing list