[R] Why are big data.frames slow? What can I do to get it faster?

Marcus Jellinghaus Marcus_Jellinghaus at gmx.de
Sun Oct 6 15:49:51 CEST 2002


Hello,

I´m quite new to this list.
I have a high frequency-dataset with more than 500.000 records.
I want to edit a data.frame "Test". My small programm runs fine with a small
part of the dataset (just 100 records), but it is very slow with a huge
dataset. Of course it get´s slower with more records, but when I change just
the size of the frame and keep the number of edited records fixed, I see
that it is also getting slower.

Here is my program:

print(dim(test)[1])
Sys.time()
for(i in 1:100) {
  test[i,6] = paste(test[i,2],"-",test[i,3], sep = "")
}
Sys.time()

I connect 2 currency symbols to a currency pair.
I always calculate only for the first 100 lines.
WHen I load just 100 lines in the data.frame "test", it takes 1 second.
When I load 1000 lines, editing 100 lines takes 2 seconds,
10,000 lines loaded and 100 lines editing takes 5 seconds,
100,000 lines loaded and editing 100 lines takes 31 seconds,
500,000 lines loaded and editing 100 lines takes 11 minutes(!!!).

My computer has 1 GB Ram, so that shouldn´t be the reason.

Of course, I could work with many small data.frames instead of one big, but
the program above is just the very first step and so I don´t want to split.

Is there a way to edit big data.frames without waiting for a long time?


Thank´s a lot for help,


Marcus

-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-
r-help mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html
Send "info", "help", or "[un]subscribe"
(in the "body", not the subject !)  To: r-help-request at stat.math.ethz.ch
_._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._



More information about the R-help mailing list