[R] Installing R1.6.0 on SGI

Laurent Gautier laurent at cbs.dtu.dk
Thu Oct 17 22:57:58 CEST 2002


On Thu, Oct 17, 2002 at 05:13:23PM +0100, Brandon Whitcher wrote:
> 
> I am currently trying to install R 1.6.0 on an SGI Octane running:
> 
> > uname -aR
> 
> IRIX64 hcu091 6.5 6.5.9m 07201608 IP30
> 
> and I am receiving a fatal error during the make step.  Any help in this matter would be greatly appreciated.
> 
> Here is the final output from "./configure"...
> 
> ----------
> 
> R is now configured for mips-sgi-irix6.5
> 
> Source directory: .
> 
> Installation directory: /usr/local
> 
> C compiler: gcc -g -O2
> 
> C++ compiler: g++ -g -O2
> 
> Fortran compiler: g77 -g -O2
> 
> X11 support: yes
> 
> Gnome support: no
> 
> Tcl/Tk support: yes
> 
> Readline support: no
> 
> R profiling support: yes
> 
> R as a shared library: no
> 
> Recommended packages: yes
> 
> ----------
> 
> A minor issue is that even though I have installed readline (although in
> 
> a nonstandard directory), it is not supporting it.
> 
> Here is the fatal error from "make"...
> 

You can check what is going on with readline in configure.log I think.
You can also use the file config.site to specify odd places 
(ex:  CPPFLAGS="-I/usr/freeware/include -I/usr/local/include" )


> ----------
> 
> building package 'methods'
> 
> all.R is unchanged
> 
> ../../../library/methods/man/methods.Rd is unchanged
> 
> UX:make: INFO: `Makedeps' is up to date.
> 
> gcc -I../../../../include -I/usr/freeware/include -g -O2 -c
> 
> do_substitute_direct.c -o do_substitute_direct.o
> 
> gcc -I../../../../include -I/usr/freeware/include -g -O2 -c
> 
> methods_list_dispatch.c -o methods_list_dispatch.o
> 
> gcc -I../../../../include -I/usr/freeware/include -g -O2 -c
> 
> method_meta_data.c -o method_meta_data.o
> 
> gcc -I../../../../include -I/usr/freeware/include -g -O2 -c
> 
> slot.c -o slot.o
> 
> gcc -I../../../../include -I/usr/freeware/include -g -O2 -c
> 
> class_support.c -o class_support.o
> 
> gcc -shared -L/usr/local/lib -o methods.so do_substitute_direct.o
> 
> methods_list_dispatch.o method_meta_data.o slot.o class_support.o
> 
> dumping R code in package 'methods'
> 
> Fatal error: The X11 shared library could not be loaded.
> 
> The error was 216482:/var/R-1.6.0/bin/R.bin: rld: Fatal Error:
> 
> unresolvable symbol in /var/R-1.6.0/modules/R_X11.so: png_set_IHDR
> 
> *** Error code 2 (bu21)
> 
> *** Error code 1 (bu21)
> 
> *** Error code 1 (bu21)
> 
> *** Error code 1 (bu21)
> 
> *** Error code 1 (bu21)
> 


I do not know about this particular one (neither I tried to install
1.6.0 on a SGI), sorry...
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