[R] (no subject)

[rinku saha]

1)I installed R-1.7.0  in Sgi machine(irix6.5).I installed all the 
bioconductor packages too.
After that i did put all my >cel files under one directory and then move 
into that directory and Start  R.Then i gave library(affy) to load it.
Welcome to Bioconductor
  To view some introductory material.........
   Simply type.......
  Creating a new  generic function for "summary" in package
Biobase
{1} TRUE

My question is did it reall yy load the package affy.

2)When  i write data <-ReadAffy()
it gives these:

1: the condition has length > 1 and only the first element will be used in: 
if (dim(intensity(cel)) != dim.intensity) stop(paste("CEL file dimension 
mismatch !\n(file",

My question is how can i make it work to read my .cel file.
I am sending you an example .cel file
[CEL]
Version=3

[HEADER]
Cols=536
Rows=536
TotalX=536
TotalY=536
OffsetX=0
OffsetY=0
GridCornerUL=237 234
GridCornerUR=4492 243
GridCornerLR=4490 4508
GridCornerLL=235 4499
Axis-invertX=0
AxisInvertY=0
swapXY=0
DatHeader=[73..46225]  MG2000062256AA:CLS=4733 RWS=4733 XIN=3  YIN=3  VE=17  
       2.0 06/22/ 0 11:15:55      GridVerify=Success   Hu6800.1sq            
                6
Algorithm=Percentile
AlgorithmParameters=Percentile:75;CellMargin:2;OutlierHigh:1.500;OutlierLow:1.004

[INTENSITY]
NumberCells=287296
CellHeader=X	Y	MEAN	STDV	NPIXELS
  0	  0	1447.3	294.2	 36
  1	  0	34282.8	4017.5	 36
  2	  0	1528.0	244.9	 36
  3	  0	33889.3	4679.7	 36
  4	  0	1073.5	211.4	 36
  5	  0	1493.8	235.2	 36
  6	  0	26558.8	5903.9	 36
  7	  0	1557.5	259.3	 36
  8	  0	25951.8	3178.6	 30
  9	  0	1497.0	292.3	 36
10	  0	26122.8	3989.7	 36
11	  0	1577.3	271.9	 36
12	  0	25029.8	4386.5	 36
13	  0	1454.8	229.0	 36
14	  0	25128.5	5666.1	 36
15	  0	1602.0	242.9	 36
16	  0	26180.0	6859.9	 36
17	  0	1652.8	304.7	 36
18	  0	26311.8	7985.2	 36
19	  0	1655.0	295.9	 36
20



3)when i try to load tcl/tk  it says:
Loading required package: tcltk
Error in firstlib(which.lib.loc, package) :
        Tcl/Tk support is not available on this syError: syntax error
Please do help me out.

Thanks
RInku

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