[R] panel ordering in nlme and augPred plots

christian_mora@vtr.net christian_mora at vtr.net
Mon Apr 25 22:17:40 CEST 2005


Hi Petr

try
plot(...,as.table=T,....)

Christian


>-- Mensaje Original --
>From: "Petr Pikal" <petr.pikal at precheza.cz>
>To: r-help at stat.math.ethz.ch
>Date: Mon, 25 Apr 2005 16:40:40 +0200
>Subject: [R] panel ordering in nlme and augPred plots
>
>
>Dear all
>
>I am trying nlme together with Pinheiro/Bates book. I constructed 
>grouped data object with suitable plotting layout (according to 
>some common factor, panels from bottom to top are in increasing 
>order).
>
>When I do nlme(... some stuff...) I get fitted object which I can plot

>with 
>
>plot(augPred(fit.nlme6, level=0:1))
>
>but it results in completely different ordering. Is there any way 
>how I can plot panels in some defined order e.g.
>
>ord.f<-order(my.1.fac, my.2.fac)
>plot(augPred(fit.nlme6, level=0:1), ord.f)
>
>The only thing I found out is that if I order grouped.data object
>
>gr.dat<-gr.dat[ord.f,]
>
>and do nlme fit, then the ordering in augPred plot is OK.
>
>BTW
>
>is there a way how to specify in plot
>
>row1 -> 3 panels
>row2 -> 3 panels
>row3 -> 3 panels
>row4 -> 2 panels
>row5 -> 4 panels
>
>Thank you
>Best regards
>
>
>Petr Pikal
>petr.pikal at precheza.cz
>
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