[R] ROracle installation problem

Mathieu Drapeau, Mr. mathieu.drapeau at mcgill.ca
Tue Aug 23 16:45:17 CEST 2005


Hi there,
I am trying to install ROracle but I get this error. I have an error in reconcilePropertiesAndPrototype.
(My LD_LIBRARY_PATH is set with the oracle lib)
 
Thanks,
Mathieu
 
 
# R CMD INSTALL --configure-args='--enable-extralibs' ../ROracle_0.5-5.tar.gz
* Installing *source* package 'ROracle' ...
creating cache ./config.cache
checking how to run the C preprocessor... cc -E
updating cache ./config.cache
creating ./config.status
creating src/Makevars
creating src/Makefile
** libs
R CMD COMPILE RS-DBI.c
make[1]: Entering directory `/tmp/R.INSTALL.10940/ROracle/src'
gcc -I/usr/lib/R/include  -I/usr/local/include -D__NO_MATH_INLINES -mieee-fp  -fPIC  -O2 -g -pipe -march=i386 -mcpu=i686 -c RS-DBI.c -o RS-DBI.o
make[1]: Leaving directory `/tmp/R.INSTALL.10940/ROracle/src'
proc               CODE=ANSI_C             MODE=ORACLE INCLUDE=/usr/lib/R/include \
                PARSE=NONE LINES=false             RS-Oracle.pc
Pro*C/C++: Release 9.2.0.1.0 - Production on Tue Aug 23 10:43:25 2005
Copyright (c) 1982, 2002, Oracle Corporation.  All rights reserved.
System default option values taken from: /opt/oracle/product/9.2.0/precomp/admin/pcscfg.cfg
R CMD COMPILE RS-Oracle.c
make[1]: Entering directory `/tmp/R.INSTALL.10940/ROracle/src'
gcc -I/usr/lib/R/include  -I/usr/local/include -D__NO_MATH_INLINES -mieee-fp  -fPIC  -O2 -g -pipe -march=i386 -mcpu=i686 -c RS-Oracle.c -o RS-Oracle.o
make[1]: Leaving directory `/tmp/R.INSTALL.10940/ROracle/src'
R CMD SHLIB -o ROracle.so RS-DBI.o RS-Oracle.o
make[1]: Entering directory `/tmp/R.INSTALL.10940/ROracle/src'
gcc -shared -L/usr/local/lib -o ROracle.so RS-DBI.o RS-Oracle.o -L/opt/oracle/product/9.2.0/lib -L/opt/oracle/product/9.2.0/network/lib -lclntst9 -lnbeq9 -lnhost9 -lnus9 -lnldap9 -lldapclnt9 -lnsslb9 -lnoname9 -lntcp9 -lntcps9 -lnsslb9 -lntcp9 -lntns9 -ldl -lm -lpthread -lnsl -ldl -lm -lsqlplus  
make[1]: Leaving directory `/tmp/R.INSTALL.10940/ROracle/src'
** R
** inst
** save image
[1] TRUE
Loading required package: DBI 
[1] FALSE
Warning message: 
There is no package called 'DBI' in: library(package, character.only = TRUE, logical = TRUE, warn.conflicts = warn.conflicts,  
[1] "dbObjectId"
Creating a new generic function for "format" in "ROracle" 
[1] "format"
[1] "show"
Creating a new generic function for "print" in "ROracle" 
[1] "print"
Error in reconcilePropertiesAndPrototype(name, slots, prototype, superClasses,  : 
        Class "DBIPreparedStatement" extends an undefined class ("DBIObject"
Execution halted
/usr/lib/R/bin/INSTALL: line 1: 11177 Broken pipe             cat "/usr/lib/R/library/ROracle/R/ROracle"
ERROR: execution of package source for 'ROracle' failed
** Removing '/usr/lib/R/library/ROracle'




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