[R] Cannot get simple data.frame binding.

Gabor Grothendieck ggrothendieck at gmail.com
Mon Aug 28 22:14:39 CEST 2006


The error message says that md1 and other have different
number of rows.   Please read the last line of every message
to r-help.

On 8/28/06, John Kane <jrkrideau at yahoo.ca> wrote:
> I am stuck on a simple problem where an example works
> fine but the real one does not.
>
> I have a data.frame where I wish to sum up some values
> across the rows and create a new data.frame with some
> of old data.frame variables and the new summed
> variable.
>
> It works fine in my simple example but I am doing
> something wrong in the real world.  In the real world
> I am loading a labeled data.frame. The orginal data
> comes from a spss file imported using spss.get but the
> current data.frame is a subset of the orginal spss
> file.
>
> EXAMPLE
> cata <- c( 1,1,6,1,1,NA)
> catb <- c( 1,2,3,4,5,6)
> doga <- c(3,5,3,6,4, 0)
> dogb <- c(2,4,6,8,10, 12)
> rata <- c (NA, 9, 9, 8, 9, 8)
> ratb <- c( 1,2,3,4,5,6)
> bata <- c( 12, 42,NA, 45, 32, 54)
> batb <- c( 13, 15, 17,19,21,23)
> id <- c('a', 'b', 'b', 'c', 'a', 'b')
> site <- c(1,1,4,4,1,4)
> mat1 <-  cbind(cata, catb, doga, dogb, rata, ratb,
> bata, batb)
>
> data1 <- data.frame(site, id, mat1)
> attach(data1)
> data1
> aa <- which(names(data1)=="rata")
> bb <- length(names(data1))
>
> mat1 <- as.matrix(data1[,aa:bb])
> food <- apply( mat1, 1, sum , na.rm=T)
> food
>
> abba <- data.frame(data1[, 1:6], food)
> abba
>
> ----------------------------------
> Real life problem
>
> >load("C:/start/R.objects/partly.corrected.materials.Rdata")
> > md1<-partly.corrected.materials
> > aa <- which(names(md1)=="oaks")
> > bb <- length(names(md1))
> >
> > # sum the values of the "other" variables
> > mat1 <- as.matrix( md1[, aa:bb] )
> > other <- apply(mat1,1, sum, na.rm=T)
> > ire1 <- data.frame(md1[, 1:11], other)
> Error in data.frame(md1[, 1:11], other) : arguments
> imply differing number of rows: 11, 75
>
> ---------------------------------------------
>
> I have simply worked around the problem by using
> ire1 <- data.frame(md1$site, md1$colour, md1$ss1 ... ,
> other)
> but I would like to know what stupid thing I am doing.
>
> Thanks
>
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> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
>



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