[R] overplot() examples fail (package:gplots)

Michael Kubovy kubovy at virginia.edu
Mon Dec 4 00:10:40 CET 2006


require(gplots)
data(rtPCR)

overplot( RQ ~ Conc..ug.ml. | Test.Substance,
	data=rtPCR,
	subset=Detector=="ProbeType 7" & Conc..ug.ml. > 0,
	same.scale=TRUE, log="xy", f=3/4,
	main="Detector=ProbeType 7",
	xlab="Concentration (ug/ml)",
	ylab="Relative Gene Quantification"
)

# Error in lowess.default(mf[[-response]], mf[[response]], f = f,  
iter = iter,  :
# 	'x' is empty
# In addition: Warning messages:
# 1: no non-missing arguments to min; returning Inf
# 2: no non-missing arguments to max; returning -Inf

**************************************
# The second example fails as well, but with:
# Error in plot.window(xlim, ylim, log, asp, ...) :
# 	need finite 'ylim' values
# In addition: Warning messages:
# 1: no non-missing arguments to min; returning Inf
# 2: no non-missing arguments to max; returning -Inf

**************************************
R version 2.4.0 (2006-10-03)
powerpc-apple-darwin8.7.0

locale:
C

attached base packages:
[1] "splines"   "grid"      "methods"   "utils"     "stats"      
"graphics"  "grDevices" "datasets"
[9] "base"

other attached packages:
     gplots      gdata     gtools       lme4        gam     
effects      Hmisc       coda    gmodels
    "2.3.2"    "2.3.1"    "2.3.0" "0.9975-9"     "0.97"    "1.0-9"     
"3.1-2"   "0.10-7"   "2.13.1"
     Matrix    reshape        JGR     iplots     JavaGD       
rJava       MASS    lattice
"0.9975-6"    "0.7.1"   "1.4-13"    "1.0-5"    "0.3-5"   "0.4-12"    
"7.2-30"  "0.14-15"

_____________________________
Professor Michael Kubovy
University of Virginia
Department of Psychology
USPS:     P.O.Box 400400    Charlottesville, VA 22904-4400
Parcels:    Room 102        Gilmer Hall
         McCormick Road    Charlottesville, VA 22903
Office:    B011    +1-434-982-4729
Lab:        B019    +1-434-982-4751
Fax:        +1-434-982-4766
WWW:    http://www.people.virginia.edu/~mk9y/




More information about the R-help mailing list