[R] Plylogenetic analysis

Gavin Simpson gavin.simpson at ucl.ac.uk
Tue Jun 27 01:56:38 CEST 2006


On Mon, 2006-06-26 at 10:59 -0300, Erica Baron wrote:
> Dear coleges,
> How to use the genotype from microsatelite markers
> from many different populations to construct a
> tridimensional phylogenetic tree with R? Any
> suggestions?
> Thank you very much!
> Baron, Erica

Hi Erica,

I know nothing about phylogenetics, but perhaps you could help yourself
by checking out the CRAN Task View on Genetics, e.g.:

http://www.stats.bris.ac.uk/R/src/contrib/Views/Genetics.html

You could also do:

RSiteSearch("phylogenetic tree")

If that doesn't get you anywhere, then you might get further help from
the list if you post some example data and perhaps a link to a image of
the type of plot you are wanting to reproduce. Some kind soul might then
be able to help...

Gav



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