[R] spatstat symbol referencing error

[David Stone]

Sparc Solaris 8
SunStudio 11 compilers
R-2.3.1
spatstat 1.10-1

R-2.3.1 and spatstat were installed using SunStudio11 compilers on a
Sparc Solaris 8 machine. No errors were reported in the compilations,
however, when I try to load spatstat I get an error:
> library(spatstat)
Loading required package: mgcv
This is mgcv 1.3-20 
Error in dyn.load(x, as.logical(local), as.logical(now)) : 
        unable to load shared library
'/software/R-2.3.1/lib/R/library/spatstat/libs/spatstat.so':
  ld.so.1: R: fatal: relocation error: file
/software/R-2.3.1/lib/R/library/spatstat/libs/spatstat.so: symbol
__1cG__CrunKpure_error6F_v_: referenced symbol not found
Error in library(spatstat) : .First.lib failed for 'spatstat'

I think the symbol is defined in the Sunstudio lib libCrun.so
(/software/sunstudio11/SUNWspro/lib/libCrun.so) but this library does
not appear in the list of libraries output by ldd ran against
spatstat.so.
My LD_LIBRARY_PATH includes /software/sunstudio11/SUNWspro/lib

Any ideas, or help, or pointers to package install troubleshooting
resources much appreciated,
David

David Stone
Systems & Database Administrator
Macaulay Institute
Craigiebuckler
Aberdeen AB15 8QH
+44 (0)1224 498200
www.macaulay.ac.uk
 


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