[R] Can plot(augPred()) be used with objects that are not groupedData?

Michael Kubovy kubovy at virginia.edu
Fri Nov 10 17:22:13 CET 2006


Dear Friends,

Is there a workaround to this problem or must the object plotted by  
plot(augPred(object, ...)) be a grouped object?

score <- c(108, 103, 96, 84, 118, 110, 129, 90, 84, 96,
     105, 113, 96, 117, 107, 85, 125, 107, 128, 84, 104,
     100, 114, 117, 110, 127, 106, 92, 125, 96, 123, 101,
     100, 103, 105, 132, 122, 133, 107, 99, 116, 91, 128,
     113, 88, 105, 112, 130)
mcc <- data.frame(
	subject = factor(rep(1:12, 4)),
	age =rep(seq(30, 48, by = 6), each = 12),
	score = score
)
mccG <- groupedData(score ~ age | subject, data = mcc)
class(mcc)
class(mccG)
mcc.lme <- lme(score ~ age, random = ~ 1 | subject, mcc)
mccG.lme <- lme(mccG)
summary(augPred(mcc.lme, primary = ~ mcc$age)) # works
summary(augPred(mccG.lme)) # works
plot(augPred(mcc.lme, primary = ~ mcc$age)) # doesn't show fitted line
plot(augPred(mccG.lme)) # does show fitted line

_____________________________
Professor Michael Kubovy
University of Virginia
Department of Psychology
USPS:     P.O.Box 400400    Charlottesville, VA 22904-4400
Parcels:    Room 102        Gilmer Hall
         McCormick Road    Charlottesville, VA 22903
Office:    B011    +1-434-982-4729
Lab:        B019    +1-434-982-4751
Fax:        +1-434-982-4766
WWW:    http://www.people.virginia.edu/~mk9y/



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