[R] Read in 250K snp chips

bhiggs bhiggs100 at yahoo.com
Fri May 25 17:20:35 CEST 2007


I'm having trouble getting summaries out of the 250K snp chips in R.  I'm
using the oligo package and when I attempt to create the necessary SnpQSet
object (to get genotype calls and intensities) using snprma, I encounter
memory issues.

Anyone have an alternative package or workaround for these large snp chips?
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