[R] [R-pkgs] R CMD check on window XP

Shu Chen chenshu at med.umich.edu
Mon Dec 15 20:14:21 CET 2008


Hi, there,

I used R CMD check  to build my "ATGGS" package under window XP system. My R version is 2.7.2. But I encounter some problems. The log file is like:
**********************************************************************************
installing R.css in C:/ATGGS.Rcheck


---------- Making package ATGGS ------------
  adding build stamp to DESCRIPTION
  installing R files
  installing inst files
find: `C:/ATGGS.Rcheck/ATGGS/csvscripts': Permission denied
make[2]: *** [C:/ATGGS.Rcheck/ATGGS/inst] Error 1
make[1]: *** [all] Error 2
make: *** [pkg-ATGGS] Error 2
Can't read C:/ATGGS.Rcheck/ATGGS/auxData: Invalid argument at c:\R\R-27~1.2/bin/INSTALL line 434
Can't remove directory C:/ATGGS.Rcheck/ATGGS/auxData: Directory not empty at c:\R\R-27~1.2/bin/INSTALL line 434
Can't read C:/ATGGS.Rcheck/ATGGS/csvData: Invalid argument at c:\R\R-27~1.2/bin/INSTALL line 434
Can't remove directory C:/ATGGS.Rcheck/ATGGS/csvData: Directory not empty at c:\R\R-27~1.2/bin/INSTALL line 434
Can't read C:/ATGGS.Rcheck/ATGGS/csvscripts: Invalid argument at c:\R\R-27~1.2/bin/INSTALL line 434
Can't remove directory C:/ATGGS.Rcheck/ATGGS/csvscripts: Directory not empty at c:\R\R-27~1.2/bin/INSTALL line 434
Can't read C:/ATGGS.Rcheck/ATGGS/doc: Invalid argument at c:\R\R-27~1.2/bin/INSTALL line 434
Can't remove directory C:/ATGGS.Rcheck/ATGGS: Directory not empty at c:\R\R-27~1.2/bin/INSTALL line 434
*** Installation of ATGGS failed ***

Removing 'C:/ATGGS.Rcheck/ATGGS'

****************************************************************************************

I am not able to delete c:/ATGGS.Rcheck until I change the permission of the folder. I'm the admin of C driver. I have full control of all other folders under  C driver.


Thanks for help.

Sue



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