[R] Package read large file

Mohamed Lajnef Mohamed.lajnef at inserm.fr
Thu Aug 20 09:30:22 CEST 2009


Dear Jim & Michael

the file contains 1000 lines and 1.200.000 columns, txt format and  i 
wish to read all the file with R if  possible, or  read a few columns?

I tried without success to turn bigmemory and colbycol packages, also 
scan and readLines  function but  It takes a long time without anything.

I have windows X64 bits 8 Go

In advance thanks
ML




jim holtman a écrit :
> A little more detail would be appropriate.  How large is "large"?
> What is the format of the file?  What do you wnat to do with the data?
>  Do you have to have it all in memory at once?  Does it exist in a
> data base already?  What type of system are you running on?  How much
> memory do you have?  ............
>
> On Wed, Aug 19, 2009 at 4:51 AM, Mohamed Lajnef<Mohamed.lajnef at inserm.fr> wrote:
>   
>> Dear R-Users,
>>
>> I am looking for packages that could read large files in R?
>> any suggestions are welcome.
>> Regards,
>> ML
>>
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>>
>>     
>
>
>
>   




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