[R] Extraction from an output

Chuck Cleland ccleland at optonline.net
Mon Jan 12 13:32:08 CET 2009


On 1/12/2009 6:42 AM, robert-mcfadden at o2.pl wrote:
> Hello,
> Would you tell my how to extract a result from a test - it's justified because I need to run this test many times. Here is an  example from authors' test:
> 
>> library("coin")
>> lungtumor <- data.frame(dose = rep(c(0, 1, 2), c(40, 50, 48)), tumor = c(rep(c(0, 1), c(38, 2)), rep(c(0, 1), c(43, 7)), rep(c(0, 1), c(33, 15))))
>> ca.test<-independence_test(tumor ~ dose, data = lungtumor, teststat = "quad")
>> ca.test
> 
>         Asymptotic General Independence Test
> 
> data:  tumor by dose 
> chi-squared = 10.6381, df = 1, p-value = 0.001108 
> 
> How to use ca.test and extract p-value and chi-squared.

> pvalue(ca.test)
[1] 0.001107836

> statistic(ca.test)
[1] 10.63806

  See the "Value" subsection on the help page for independence_test().

> Robert 
> 
> ______________________________________________
> R-help at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code. 

-- 
Chuck Cleland, Ph.D.
NDRI, Inc. (www.ndri.org)
71 West 23rd Street, 8th floor
New York, NY 10010
tel: (212) 845-4495 (Tu, Th)
tel: (732) 512-0171 (M, W, F)
fax: (917) 438-0894




More information about the R-help mailing list