[R] Question about datatypes/plotting issue

David Winsemius dwinsemius at comcast.net
Wed Mar 11 03:58:41 CET 2009


You need to convert W$Date into a real date variable. At the moment it  
is just a character variable.

 > str(W)
'data.frame':	265 obs. of  23 variables:
  $ Date            : Factor w/ 265 levels " ","April 1987",..: 1 90  
68 156 2 178 134 ...
  $ AZ.Phoenix      : Factor w/ 236 levels "","100.00","100.43",..:  
236 1 1 1 1 1 1 1 1 1 ...
  $ CA.Los.Angeles  : Factor w/ 260 levels "100.00","100.02",..: 260  
113 114 115 116 ...
  $ CA.San.Diego    : Factor w/ 261 levels "100.00","101.07",..: 261  
109 110 111 112 ...
  $ CA.San.Francisco: Factor w/ 256 levels "100.00","102.70",..: 256  
108 109 110 111 ...
.(output trimmed)
.
.
?Date  # not the variable name, the R class name
?format.Date
?strptime

Unfortunately I seem to be at one of the many limits to my knowledge:
This code behaves in the manner I expected:

 > format(Sys.time(), "%a %b %d %X %Y %Z")
[1] "Tue Mar 10 22:19:28 2009 EDT"
 > strptime(format(Sys.time(), "%a %b %d %X %Y %Z"), format="%a %b %d  
%X %Y %Z")
[1] "2009-03-10 22:20:04"

Whereas this code does not:
 > format(Sys.Date(), "%B %Y")
[1] "March 2009"
 > as.Date(format(Sys.Date(), "%B %Y"), "%B %Y")
# would have assumed one was the inverse of the other, but ...

[1] NA

For some reason I cannot get the space delimited Month-YYYY combo to  
convert. I can getother  space delimited formats to work for input or  
output:
 > as.Date("03 1998", "%M %Y")
[1] "1998-03-10"

 > format(Sys.Date(), "%B %Y")
[1] "March 2009"

Puzzled;
-- 
David Winsemius

On Mar 10, 2009, at 9:15 PM, Oscar Bonilla wrote:

> Hi,
>
> I am trying to plot the Case-Shiller index found at: http://www2.standardandpoors.com/spf/pdf/index/CSHomePrice_History_022445.xls
>
> The way I'm importing it into R is as follows:
>
> 	library(gdata)
> 	W <- read.xls("http://www2.standardandpoors.com/spf/pdf/index/CSHomePrice_History_022445.xls 
> ", header=TRUE)
> 	attach(W)
>
> To give you and idea of what the data looks like:
>
> > head(W)
>           Date AZ.Phoenix CA.Los.Angeles CA.San.Diego CA.San.Francisco
> 1                     PHXR           LXXR         SDXR              
> SFXR
> 2  January 1987                     59.33        54.67             
> 46.61
> 3 February 1987                     59.65        54.89             
> 46.87
> 4    March 1987                     59.99        55.16             
> 47.32
> 5    April 1987                     60.81        55.85             
> 47.69
> 6      May 1987                     61.67        56.35             
> 48.31
>  CO.Denver DC.Washington FL.Miami FL.Tampa GA.Atlanta IL.Chicago  
> MA.Boston
> 1      DNXR          WDXR     MIXR     TPXR       ATXR        
> CHXR      BOXR
> 2     50.20         64.11    68.50    77.33                  
> 53.55     70.04
> 3     49.96         64.77    68.76    77.93                  
> 54.64     70.08
> 4     50.15         65.71    69.23    77.76                  
> 54.80     70.00
> 5     50.55         66.40    69.20    77.56                  
> 54.88     70.70
> 6     50.63         67.27    69.46    77.85                  
> 55.43     71.51
>  MI.Detroit MN.Minneapolis NC.Charlotte NV.Las.Vegas NY.New.York  
> OH.Cleveland
> 1       DEXR           MNXR         CRXR         LVXR         
> NYXR         CEXR
> 2                                  63.39        66.36        
> 74.42        53.53
> 3                                  63.94        67.03        
> 75.43        53.50
> 4                                  64.17        67.34        
> 76.25        53.68
> 5                                  64.81        67.88        
> 77.34        53.75
> 6                                  65.18        67.90        
> 79.16        54.71
>  OR.Portland TX.Dallas WA.Seattle Composite.10 Composite.20
> 1        POXR      DAXR       SEXR         CSXR     SPCS20R
> 2       41.05                             62.82
> 3       41.28                             63.39
> 4       41.06                             63.87
> 5       40.96                             64.57
> 6       41.24                             65.56
>
>
> Now on to the problem... if I just run
>
> 	plot(CA.San.Francisco ~ Date)
>
> I get:
> <pastedGraphic.png>
>
> Which I suspect is a problem because the Date column is not really a  
> Date, it is a "factor"
>
> 	> class(Date)
> 	[1] "factor"
>
> If I run:
> 	plot(as.numeric(CA.San.Francisco), type="l")
>
> I get:
>
> <pastedGraphic.png>
>
>
> which is wrong, as CA.San.Francisco has no such discontinuity.
>
> > CA.San.Francisco
>  [1] SFXR   46.61  46.87  47.32  47.69  48.31  48.83  49.49  49.94   
> 50.69
> [11] 51.33  51.80  52.03  52.24  52.64  53.19  54.19  56.09  58.22   
> 58.70
> [21] 59.00  59.50  60.37  61.31  62.20  62.66  63.32  64.64  66.27   
> 67.77
> [31] 69.26  70.27  71.36  72.31  72.95  73.25  73.02  72.87  72.95   
> 73.50
> [41] 74.57  75.12  75.15  74.81  74.45  74.24  73.44  72.58  71.47   
> 71.17
> [51] 70.27  69.56  69.46  70.13  70.83  71.39  71.52  71.55  71.21   
> 70.69
> [61] 70.05  69.67  69.48  69.17  69.26  69.86  70.02  70.00  69.64   
> 69.51
> [71] 69.28  68.85  68.21  67.77  67.44  67.09  67.59  67.90  67.99   
> 67.65
> [81] 67.63  67.50  67.18  66.77  66.27  65.98  65.79  66.37  67.05   
> 67.70
> [91] 68.15  68.38  68.40  68.21  68.17  68.04  67.93  67.73  67.40   
> 66.79
> [101] 67.08  67.31  67.50  67.72  67.78  67.76  67.30  66.80  66.43   
> 66.15
> [111] 65.97  65.92  66.44  67.05  67.67  68.02  68.35  68.43  68.53   
> 68.72
> [121] 68.69  68.80  68.81  69.78  71.09  72.19  73.12  73.75  74.43   
> 74.76
> [131] 75.22  75.31  75.81  76.19  76.53  77.48  79.08  80.82  82.41   
> 83.52
> [141] 84.41  85.06  85.05  84.66  84.50  85.03  85.93  87.51  89.21   
> 90.82
> [151] 92.52  94.20  95.14  96.15  96.72  97.87  98.90  100.00 102.70  
> 106.56
> [161] 110.97 115.01 118.45 119.48 119.95 120.94 123.08 125.66 128.58  
> 131.16
> [171] 133.27 134.10 134.38 134.09 132.64 130.95 129.15 128.60 128.01  
> 126.99
> [181] 125.47 125.13 126.06 128.79 132.62 136.07 139.35 141.02 141.93  
> 142.29
> [191] 142.74 143.06 142.40 141.90 142.19 143.00 144.69 145.53 146.53  
> 147.75
> [201] 148.72 150.25 151.75 153.36 154.62 155.93 158.11 160.90 164.65  
> 167.76
> [211] 171.51 173.85 175.89 178.15 180.75 183.15 185.72 189.35 193.50  
> 198.30
> [221] 201.86 205.52 208.92 211.56 212.86 214.73 215.55 215.70 215.11  
> 214.78
> [231] 215.50 216.04 217.52 218.37 218.12 217.63 217.22 216.37 215.42  
> 213.84
> [241] 212.13 211.78 210.78 211.09 211.47 210.89 209.48 208.64 208.15  
> 206.46
> [251] 202.03 195.49 189.23 183.81 174.54 168.38 164.63 162.70 159.83  
> 156.88
> [261] 151.42 145.53 139.44 135.28 130.12
> 256 Levels: 100.00 102.70 106.56 110.97 115.01 118.45 119.48  
> 119.95 ... SFXR
>
> However, as.numeric(CA.San.Francisco) does have it!
>
> > as.numeric(CA.San.Francisco)
>  [1] 256 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122  
> 123 124
> [19] 125 126 127 128 129 130 131 132 133 134 140 164 185 199 205 211  
> 214 217
> [37] 215 213 214 219 224 227 228 226 223 221 218 212 207 203 199 190  
> 187 198
> [55] 201 206 208 209 204 200 197 192 188 184 185 194 196 195 191 189  
> 186 183
> [73] 173 164 154 149 156 166 168 158 157 155 150 144 140 138 135 141  
> 147 160
> [91] 171 175 176 173 172 170 167 162 153 145 148 152 155 161 165 163  
> 151 146
> [109] 142 139 137 136 143 147 159 169 174 177 178 180 179 181 182  
> 193 202 210
> [127] 216 220 222 225 229 230 231 232 233 234 235 236 237 238 239  
> 244 243 241
> [145] 240 242 245 246 247 248 249 250 251 252 253 254 255   1   2    
> 3   4   5
> [163]   6   7   8   9  10  13  17  23  26  28  29  27  25  22  20   
> 18  16  15
> [181]  12  11  14  19  24  31  32  34  36  38  40  42  39  35  37   
> 41  43  44
> [199]  45  46  47  48  50  51  52  53  55  57  60  61  63  64  66   
> 67  68  69
> [217]  71  73  74  76  77  79  83  89  92  94  99 100  96  95  98  
> 101 104 107
> [235] 106 105 103 102  97  93  91  90  85  87  88  86  84  82  81   
> 80  78  75
> [253]  72  70  65  62  59  58  56  54  49  44  33  30  21
>
> What I'd like to get, is a graph like this (the red line):
>
> <pastedGraphic.png>
>
> I'm really puzzled about what's going on here. Any help would be  
> greatly appreciated.
>
> Thanks,
>
> -Oscar
>
> ______________________________________________
> R-help at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.

David Winsemius, MD
Heritage Laboratories
West Hartford, CT




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