[R] Aov: SE's for split plot

Prew, Paul Paul.Prew at ecolab.com
Fri Nov 13 22:37:29 CET 2009


Hello,

Can anyone explain why the following message appears for the function model.tables, where se=T?  In the V&R MASS text, p.285 the se=T option works for a split plot example that seems similar to my operation.   But the model.tables documentation, in the Arguments section for "se", states "should standard errors be computed?". 

"Warning:  Warning in model.tables.aovlist(Magic.aov, type = "means", se=T):
SE's for type 'means' are not implemented yet"

I am trying to get the Standard Errors (SE's) for a split plot using the aov function.  I'm not sure, it may be a split-split plot design.  There are two crossed factors: 1)Formula   2)SwatchType.
* Formula is applied to the whole plots.  WP = Load.
* Each Whole plot is further divided into 3 split plots. SP = BackrNbr, 3 BackrNbrs within a single Load.
* Each split plot is the block for a completely randomized design using factor = SwatchType. All 6 SwatchTypes are applied within each BackrNbr

Magic.aov<-aov(SoilRemoval~Formula*SwatchType+Error(Load/BackrNbr),data=Magic.dat)
model.tables(Magic.aov, type="means",se=T)  ### the table of means are printed, no SE's


> str(Magic.dat)
'data.frame':	162 obs. of  7 variables:
 $ BackrNbr   : Factor w/ 27 levels "1","2","3","4",..: 1 1 1 1 1 1 2 2 2 2 ...
 $ Load       : Factor w/ 9 levels "1","2","3","4",..: 1 1 1 1 1 1 1 1 1 1 ...
 $ Formula    : Factor w/ 3 levels "CONTROL","EXP1",..: 2 2 2 2 2 2 2 2 2 2 ...
 $ SwatchType : Factor w/ 6 levels "DMO","Dust.Seb",..: 2 6 1 5 4 3 2 6 1 5 ...
 $ L.Initial  : num  71.2 73.9 69.3 58.6 40.6 ...
 $ L.Final    : num  89.8 75.6 70.5 69.6 58.9 ...
 $ SoilRemoval: num  75.08 7.88 4.71 29.44 33.15 ...

Thank you for your consideration,
Paul

Paul Prew  |  Statistician
651-795-5942   |   fax 651-204-7504 
Ecolab Research Center  | Mail Stop ESC-F4412-A 
655 Lone Oak Drive  |  Eagan, MN 55121-1560 

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