[R] mac os X: mprobit fails to install

stephane Luchini stephane.luchini at gmail.com
Sun Nov 22 22:00:48 CET 2009


Thanks.

I have 10.5.8 with R 2.10.0 now (i still had 2.9 in my previous
messages). I also have gcc-4.2 installed but no Xcode package.

It still fails to install - can it be the Xcode package? Where can I
find it - I don't have my install CDs with me and will not get them
soon?

Stephane


2009/11/22 David Winsemius <dwinsemius at comcast.net>:
> There were quite a few "implicit declaration" warning messages when I
> followed Phil's advice, but I do seem to get a complete build on a Mac
> 10.5.8 running 64 bit R 2.10.0.
>
> Have you installed the Xcode package? The gcc-4.2?
>
> --
> David.
> On Nov 22, 2009, at 3:15 PM, SL wrote:
>
>> I have tried your command but without success. Any idea? Here is my log:
>>
>> Macbook:$ PKG_CFLAGS=-I/usr/include/sys R CMD INSTALL mprobit_0.9-2.tar.gz
>>
>> * Installing to library ‘/Users/stephaneluchini/Library/R/2.9/library’
>> * Installing *source* package ‘mprobit’ ...
>> ** libs
>> ** arch - i386
>> sh: make: command not found
>> ERREUR : compilation failed pour le package ‘mprobit’
>> * Removing ‘/Users/stephaneluchini/Library/R/2.9/library/mprobit’
>>
>> 2009/11/22 Phil Spector <spector at stat.berkeley.edu>:
>>>
>>> Stephane -
>>>   The check log indicated that malloc.h couldn't be found.
>>> Since that header file  is located  in /usr/include/sys on Macs,
>>> you could do the following:
>>>
>>> 1.  Download mprobit_0.9-2.tar.gz from your local CRAN mirror.
>>> 2.  At a terminal, type
>>>
>>>     PKG_CFLAGS=-I/usr/include/sys R CMD INSTALL mprobit_0.9-2.tar.gz
>>>
>>> They'll be some warning messages, but the package should get built.
>>>
>>>                                       - Phil Spector
>>>                                        Statistical Computing Facility
>>>                                        Department of Statistics
>>>                                        UC Berkeley
>>>                                        spector at stat.berkeley.edu
>>>
>>> On Sun, 22 Nov 2009, stephane Luchini wrote:
>>>
>>>> Hi all,
>>>>
>>>> any chance that someone got through the installation problem of
>>>> mprobit on mac os X?
>>>>
>>>> Stephane
>>>>
>>>> ______________________________________________
>>>> R-help at r-project.org mailing list
>>>> https://stat.ethz.ch/mailman/listinfo/r-help
>>>> PLEASE do read the posting guide
>>>> http://www.R-project.org/posting-guide.html
>>>> and provide commented, minimal, self-contained, reproducible code.
>>>>
>>>
>>
>> ______________________________________________
>> R-help at r-project.org mailing list
>> https://stat.ethz.ch/mailman/listinfo/r-help
>> PLEASE do read the posting guide
>> http://www.R-project.org/posting-guide.html
>> and provide commented, minimal, self-contained, reproducible code.
>
> David Winsemius, MD
> Heritage Laboratories
> West Hartford, CT
>
> ______________________________________________
> R-help at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-help
> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
>




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