[R] data frames; matching/merging

Gabor Grothendieck ggrothendieck at gmail.com
Mon Feb 8 18:11:16 CET 2010


Here are 3 solutions assuming DF contains the data frame:

> # 1. aggregate
> aggregate(DF[2], DF[1], min)
  V1 V2
1  a  2
2  b  9
3  c  4

> # 2. aggregate.formula - requires R 2.11.x
> aggregate(V2 ~ V1, DF, min)
  V1 V2
1  a  2
2  b  9
3  c  4

> # 3. SQL using sqldf
> library(sqldf)
> sqldf("select V1, min(V2) V2 from DF group by V1")
  V1 V2
1  a  2
2  b  9
3  c  4

> # 4. summaryBy in the doBy package
> library(doBy)
> summaryBy(V2 ~., DF, FUN = min, keep.names = TRUE)
  V1 V2
1  a  2
2  b  9
3  c  4

On Mon, Feb 8, 2010 at 11:39 AM, Jonathan <jonsleepy at gmail.com> wrote:
> Hi all,
>    I'm feeling a little guilty to ask this question, since I've
> written a solution using a rather clunky for loop that gets the job
> done.  But I'm convinced there must be a faster (and probably more
> elegant) way to accomplish what I'm looking to do (perhaps using the
> "merge" function?).  I figured somebody out there might've already
> figured this out:
>
> I have a dataframe with two columns (let's call them V1 and V2).  All
> rows are unique, although column V1 has several redundant entries.
>
> Ex:
>
>     V1     V2
> 1    a        3
> 2    a        2
> 3    b        9
> 4    c        4
> 5    a        7
> 6    b        11
>
>
> What I'd like is to return a dataframe cut down to have only unique
> entires in V1.  V2 should contain a vector, for each V1, that is the
> minimum of all the possible choices from the set of redundant V1's.
>
> Example output:
>
>      V1     V2
> 1     a        2
> 2     b        9
> 3     c        4
>
>
> If somebody could (relatively easily) figure out how to get closer to
> a solution, I'd appreciate hearing how.  Also, I'd be interested to
> hear how you came upon the answer (so I can get better at searching
> the R resources myself).
>
> Regards,
> Jonathan
>
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