[R] lapack error on Redhat Linux Fedora 11

Patrick Connolly p_connolly at slingshot.co.nz
Mon Jan 4 20:11:30 CET 2010


On Thu, 24-Dec-2009 at 01:14PM -0800, Hongbin Zhang wrote:

|> 
|> 
|> Hi,
|> 
|> The following errors occurs when I run the nlme's example:
|> 
|> ------------------------------------------------------------------
|> Error in chol.default((value + t(value))/2) :
|>   lapack routines cannot be loaded
|> In addition: Warning message:
|> In chol.default((value + t(value))/2) :
|>   unable to load shared library '/usr/local/lib/R/modules//lapack.so':
|>   /usr/local/lib/R/modules//lapack.so: cannot restore segment prot after reloc: Permission denied
|> -------------------------------------------------------------------
|> 
|> I used following different options to configure R (2.10.0/2.10.1):
|>         1. --with-blas=no --with-lapack=no 
|>         2. --with-blas=yes --with-lapack=yes
|> In either case, the above error occurs.
|> 
|> Help please.

What do you get when you do this (from a shell)?

yum list lapack


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~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.~.   
   ___    Patrick Connolly   
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 _( Y )_  	         Average minds discuss events 
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