[R] ?summaryRprof running at 100% cpu for one hour ...

Uwe Ligges ligges at statistik.tu-dortmund.de
Sun Nov 21 17:30:42 CET 2010



On 21.11.2010 01:30, Kjetil Halvorsen wrote:
> see below.
>
> 2010/11/20 Uwe Ligges<ligges at statistik.tu-dortmund.de>:
>>
>>
>> On 19.11.2010 21:43, Kjetil Halvorsen wrote:
>>>
>>> This is very strange. (Debian squeeze, R 2.12.0 compiled from source)
>>>
>>> I did some moderately large computation (including svd of a 560x50
>>> matrix),
>>> running a few minutes, and R memory increasing to about 900MB on this
>>> 2 GB ram laptop. I had done Rprof(memory.profiling=TRUE) first.
>>> Then doing summaryRprof().
>>> Then doing
>>> ?summaryRprof
>>> and then the computer running with one of two cores at 100% for more
>>> than an hour!
>>>
>>> Whats happening?
>>
>> We do not know. What about sending a reproducible example?
>
> I will try. But how do I send this info

Well, just send what you typed to get into that state ...

Uwe

> when I have to kill
> the R-process from outside?
>
> kjetil
>
>>
>> Best,
>> Uwe
>>
>>
>>> (running R from within emacs-ess)
>>> Kjetil
>>>
>>> ______________________________________________
>>> R-help at r-project.org mailing list
>>> https://stat.ethz.ch/mailman/listinfo/r-help
>>> PLEASE do read the posting guide
>>> http://www.R-project.org/posting-guide.html
>>> and provide commented, minimal, self-contained, reproducible code.
>>



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