[R] 'tcltk' does not have a name space

chen chao chenchaor at gmail.com
Sat Oct 30 19:55:25 CEST 2010


Hi, All

I got trouble on installing the qvalue package. Error message: package
'tcltk' does not have a name space

[cchen1 at ibibmem Yale_CB]$ R CMD INSTALL qvalue.tar.gz
* installing to library '/cchome/cchen1/R/x86_64-unknown-linux-gnu-library/2.10'

* installing *source* package 'qvalue' ...
** R
** data
** inst
** preparing package for lazy loading
Error : package 'tcltk' does not have a name space
ERROR: lazy loading failed for package 'qvalue'
* removing '/cchome/cchen1/R/x86_64-unknown-linux-gnu-library/2.10/qvalue'

Or by bioconductor

> source("http://bioconductor.org/biocLite.R")
biocLite("qvalue")
> biocLite("qvalue")
Using R version 2.10.1, biocinstall version 2.5.11.
Installing Bioconductor version 2.5 packages:
[1] "qvalue"
Please wait...

Warning in install.packages(pkgs = pkgs, repos = repos, ...) :
  argument 'lib' is missing: using '/cchome/cchen1/R/x86_64-unknown-linux-gnu-li
brary/2.10'
trying URL 'http://cran.fhcrc.org/src/contrib/qvalue_1.24.0.tar.gz'
Content type 'application/x-gzip' length 458634 bytes (447 Kb)
opened URL
==================================================
downloaded 447 Kb

* installing *source* package 'qvalue' ...
** R
** data
** inst
** preparing package for lazy loading
Error : package 'tcltk' does not have a name space
ERROR: lazy loading failed for package 'qvalue'
* removing '/userhom2/3/cchen1/R/x86_64-unknown-linux-gnu-library/2.10/qvalue'

The downloaded packages are in
        '/tmp/RtmpzDBPsF/downloaded_packages'
Warning message:
In install.packages(pkgs = pkgs, repos = repos, ...) :
  installation of package 'qvalue' had non-zero exit status

> version
               _
platform       x86_64-unknown-linux-gnu
arch           x86_64
os             linux-gnu
system         x86_64, linux-gnu
status
major          2
minor          10.1
year           2009
month          12
day            14
svn rev        50720
language       R
version.string R version 2.10.1 (2009-12-14)

Any helps? Thanks so much.

-- 
Chen, Chao
Psychiatry
University of Chicago
924 E 57th St, Chicago, IL 60637
U. S. A.
MOE Key Laboratory of Contemporary Anthropology and Center for
Evolutionary Biology,
School of Life Sciences and Institutes of Biomedical Sciences,
Fudan University
220# Handan Road, Shanghai (200433)
P.R.China



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