[R] Scripting help

Philipp Pagel p.pagel at wzw.tum.de
Wed Sep 15 19:47:34 CEST 2010


On Wed, Sep 15, 2010 at 12:22:15PM -0400, Ayyappa Chaturvedula wrote:
> Dear all, I am new to R and this group. I have good experience in S
> scripts.  I need some orientation on data imports, general plotting
> functions. Can you please direct me?

Welcome to R. Coming from an S background you should have no problems
to adjust quickly. For data import have a look at the "R Data
Import/Export" manual:

http://cran.r-project.org/doc/manuals/R-data.html

Plotting is not to different from S-Plus. As far as my knowledge goes
there are 3 differnet plotting frameworsk in R:

1) "Basic" plot functions like plot or hist some of which are covered in 
the Introduction to R

2) lattice (the R aequivalent of trellis graphics

covered in many manual pages, many tutorials and talks google will
quickly find and last but not least the book
"Lattice: Multivariate Data Visualization with R" by Deepayan
Sarkar who implemented lattice

3) ggplot2

See http://had.co.nz/ggplot2/ for documentation
and consider the book "ggplot2: Elegant Graphics for Data Analysis" by
Hadley Wickham (the author of ggplot2)


I use all three frameworks on a regular basis - choosing the
respective functions depending on the complexity of the task.

cu
	Philipp

-- 
Dr. Philipp Pagel
Lehrstuhl für Genomorientierte Bioinformatik
Technische Universität München
Wissenschaftszentrum Weihenstephan
Maximus-von-Imhof-Forum 3
85354 Freising, Germany
http://webclu.bio.wzw.tum.de/~pagel/



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