[R] plotting a function with given formula in ggplot2
Dennis Murphy
djmuser at gmail.com
Fri Nov 11 06:50:32 CET 2011
Hi:
Borrowing from this thread, courtesy of Brian Diggs:
http://groups.google.com/group/ggplot2/browse_thread/thread/478f9e61d41b4678/ed323c497db61156?lnk=gst&q=stat_function#ed323c497db61156
...here's a small reproducible example:
ddf <- data.frame(x = 1:10, y = 0.4 + 0.6 * (1:10) + rnorm(10))
# Find the linear model coefficients
lmc <- coef(lm(y ~ x, data = ddf))
# Create a function to produce the fitted line
lmeq <- function(x) lmc[1] + lmc[2] * x
# Construct the ggplot() and use stat_function():
ggplot(ddf, aes(x = x, y = y)) +
geom_point() +
stat_function(fun = lmeq, colour = 'red', size = 1)
HTH,
Dennis
On Thu, Nov 10, 2011 at 10:47 AM, Curiouslearn <curiouslearn at gmail.com> wrote:
> Hi All,
>
> I have a scatter plot produced using ggplot2 and I want to add the
> regression line to this scatter plot. I suppose I can use
> geom_smooth() to do this, but for the sake of learning ( I am new both
> to R and ggplot2), I want to try and add it as a function (something
> that curve() does in the standard R plotting). I did some search and
> found that stat_function() can be used for this. But somehow it is not
> working. The following is my code. Can you please tell me where I am
> going wrong and what the correct code would be:
>
> reg1 <- lm(kid_score ~ mom_hs, data=iqdata)
>
> scatter <- ggplot() + geom_point(data=iqdata,
>
> aes(x=as.factor(mom_hs), y=kid_score) )
> + xlab("Mother's High School Status")
> + ylab("Children's Test Score")
> + stat_function(fun=function(x)
> coef(reg1)[1] + coef(reg1)[2] * x)
>
> I understand that you probably do not have the data I am using (I am
> trying this out from Gelman Hill's book on Multilevel models). But I
> was hoping you may be able to point out the error without the data.
>
> Thanks for your help.
>
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> and provide commented, minimal, self-contained, reproducible code.
>
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