[R] Error adding Bigmemory package

RogerP rpickeri at mail.nih.gov
Wed Nov 30 21:53:27 CET 2011

I am trying to add the bigmemory packages but I get the following error

In file included from bigmemory.cpp:14:0:
../inst/include/bigmemory/isna.hpp: In function 'bool neginf(double)':
../inst/include/bigmemory/isna.hpp:22:57: error: 'isinf' was not declared in
this scope
make: *** [bigmemory.o] Error 1
ERROR: compilation failed for package 'bigmemory'
* removing '/usr/local/lib/R/library/bigmemory'
* restoring previous '/usr/local/lib/R/library/bigmemory'

The downloaded packages are in
Updating HTML index of packages in '.Library'
Warning message:
In install.packages("bigmemory") :
  installation of package 'bigmemory' had non-zero exit status
> install.packages(gsl)
Error in install.packages(gsl) : object 'gsl' not found
> install.packages(gnulib)
Error in install.packages(gnulib) : object 'gnulib' not found

I am using the GNU compiler version 4.5.1 from blastwave on a Solaris 10
I can't seem to find how to compile bigmembory successfully.  I can complile
and add
other packages.


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